Application of a newly developed ARB software-integrated tool for in silico terminal restriction fragment length polymorphism analysis reveals the dominance of a novel pmoA cluster in a forest soil.

نویسندگان

  • Peter Ricke
  • Steffen Kolb
  • Gesche Braker
چکیده

TRF-CUT, an ARB-implemented tool, was developed to predict in silico the terminal restriction fragments of aligned small-subunit rRNA gene or functional gene sequences. Application of this new tool to perform directed terminal restriction fragment length polymorphism analysis of pmoA products obtained from a forest soil revealed that novel cluster I methanotrophic bacteria were dominant.

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عنوان ژورنال:
  • Applied and environmental microbiology

دوره 71 3  شماره 

صفحات  -

تاریخ انتشار 2005